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MetaNetX
Automated Model Construction and Genome Annotation for Large-Scale Metabolic Networks
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SystemsX.ch
The Swiss Initiative in Systems Biology
My Selection
Summary
Pick from repository
Import model
Upload reactions
Delete models
Upload genome
Revived!
Analyze
Flux balance (FBA)
Groups of coupled reactions (GCR)
Blocked reactions (BLO)
Reaction knockout (RKO)
Gene/peptide knockout (PKO)
Create / Modify
Combine logically
Split and merge
Growth recovery (GRE)
Build from a genome (BUILD)
Revived!
Utilities
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MNXref ID mapper
new
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Documents
Getting started
A short tutorial
Model internals
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Reactions with MNXM729945
Add selected reac/enzy to a model in my sandbow, or create a new one
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MNXref ID
Enzy
1
(2E)-2-methylbut-2-enoyl-CoA
+
1
(R)-carnitine
cytoplasm
<=>
1
CoA
+
1
O-tiglylcarnitine
cytoplasm
MNXR96422
CPT1A_HUMAN
CPT1B_HUMAN
CPT1C_HUMAN
-- Select --
CPT1A_HUMAN
CPT1B_HUMAN
CPT1C_HUMAN
1
O-tiglylcarnitine
extracellular region
<?>
1
O-tiglylcarnitine
model boundary
MNXR104864
1
(2E)-2-methylbut-2-enoyl-CoA
+
1
UNK:MAM02348
cytoplasm
<=>
1
CoA
+
1
O-tiglylcarnitine
cytoplasm
NA
CPT1A_HUMAN
CPT1B_HUMAN
CPT1C_HUMAN
-- Select --
CPT1A_HUMAN
CPT1B_HUMAN
CPT1C_HUMAN
1
O-tiglylcarnitine
extracellular region
<?>
1
O-tiglylcarnitine
cytoplasm
MNXR104864
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