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MetaNetX
Automated Model Construction and Genome Annotation for Large-Scale Metabolic Networks
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SystemsX.ch
The Swiss Initiative in Systems Biology
My Selection
Summary
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Import model
Upload reactions
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Upload genome
Revived!
Analyze
Flux balance (FBA)
Groups of coupled reactions (GCR)
Blocked reactions (BLO)
Reaction knockout (RKO)
Gene/peptide knockout (PKO)
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Combine logically
Split and merge
Growth recovery (GRE)
Build from a genome (BUILD)
Revived!
Utilities
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MNXref ID mapper
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Getting started
A short tutorial
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Reactions with MNXM603
Add selected reac/enzy to a model in my sandbow, or create a new one
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MNXref ID
Enzy
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MNXref ID
Enzy
1
gamma-L-glutamyltyramine
+
1
ADP
+
1
phosphate
+
1
H(+)
generic compartment 1
<=>
1
ATP
+
1
L-glutamate
+
1
tyramine
generic compartment 1
MNXR114214
MFND_METJA
-- Select --
MFND_METJA
1
O2
+
1
NADPH
+
1
tyramine
+
1
H(+)
cytoplasm
<?>
1
H2O
+
1
dopamine
+
1
NADP(+)
cytoplasm
MNXR156002
1
tyramine
+
1
CO2
cytoplasm
<--
1
H(+)
+
1
L-tyrosine
cytoplasm
MNXR104990
100761742
peg.1317
peg.2147
peg.2527
DDC_HUMAN
DDC_MOUSE
-- Select --
100761742
peg.1317
peg.2147
peg.2527
DDC_HUMAN
DDC_MOUSE
2
dopamine
generic compartment 1
<=>
1
O2
+
2
tyramine
generic compartment 1
MNXR194632
PPO8_ANOGA
-- Select --
PPO8_ANOGA
1
tyramine
+
1
CO2
generic compartment 1
<=>
1
H(+)
+
1
L-tyrosine
generic compartment 1
MNXR104990
TYDC2_ARATH
TDC1_CAEEL
TYRDC_ENTFA
MFNA_METAC
MFNA_METBF
MFNA_METHJ
MFNA_METJA
MFNA_METKA
MFNA_METTH
TYDC_ORYSJ
-- Select --
TYDC2_ARATH
TDC1_CAEEL
TYRDC_ENTFA
MFNA_METAC
MFNA_METBF
MFNA_METHJ
MFNA_METJA
MFNA_METKA
MFNA_METTH
TYDC_ORYSJ
1
adenosine 3',5'-bisphosphate
+
1
sulfuric acid [4-(2-aminoethyl)phenyl] ester
+
1
H(+)
cytoplasm
<--
1
3'-phosphoadenylyl sulfate
+
1
tyramine
cytoplasm
MNXR188942
G3IJZ4_CRIGR
ST1A1_HUMAN
ST1A2_HUMAN
ST1A3_HUMAN
ST1A4_HUMAN
-- Select --
G3IJZ4_CRIGR
ST1A1_HUMAN
ST1A2_HUMAN
ST1A3_HUMAN
ST1A4_HUMAN
1
(S)-S-adenosyl-L-methionine
+
1
tyramine
cytoplasm
-->
1
S-adenosyl-L-homocysteine
+
1
N-methyltyramine
+
1
H(+)
cytoplasm
MNXR188778
A0A2R8Y5M8_HUMAN
COMT_HUMAN
INMT_HUMAN
LRC51_HUMAN
-- Select --
A0A2R8Y5M8_HUMAN
COMT_HUMAN
INMT_HUMAN
LRC51_HUMAN
1
O2
+
1
NADH
+
1
tyramine
+
1
H(+)
cytoplasm
<=>
1
H2O
+
1
dopamine
+
1
NAD(+)
cytoplasm
MNXR107479
YUC3_ARATH
-- Select --
YUC3_ARATH
1
tyramine
extracellular region
<?>
1
tyramine
model boundary
MNXR104985
1
(4-hydroxyphenyl)acetaldehyde
+
1
NH4(+)
+
1
H2O2
periplasmic space
<--
1
O2
+
1
H2O
+
1
tyramine
periplasmic space
MNXR104996
AMO_ECOLI
A6T8H8_KLEP7
Q8ZNA2_SALTY
-- Select --
AMO_ECOLI
A6T8H8_KLEP7
Q8ZNA2_SALTY
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