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MetaNetX
Automated Model Construction and Genome Annotation for Large-Scale Metabolic Networks
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SystemsX.ch
The Swiss Initiative in Systems Biology
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Summary
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Import model
Upload reactions
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Upload genome
Revived!
Analyze
Flux balance (FBA)
Groups of coupled reactions (GCR)
Blocked reactions (BLO)
Reaction knockout (RKO)
Gene/peptide knockout (PKO)
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Combine logically
Split and merge
Growth recovery (GRE)
Build from a genome (BUILD)
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A short tutorial
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Reactions with MNXM158937
Add selected reac/enzy to a model in my sandbow, or create a new one
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Enzy
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MNXref ID
Enzy
1
O-sebacoylcarnitine
peroxisome
<=>
1
O-sebacoylcarnitine
cytoplasm
MNXR96374
MCAT_HUMAN
-- Select --
MCAT_HUMAN
1
CoA
+
1
O-sebacoylcarnitine
peroxisome
<=>
1
decanedioyl-CoA
+
1
UNK:MAM02348
peroxisome
NA
OCTC_HUMAN
-- Select --
OCTC_HUMAN
1
(R)-carnitine
+
1
H(+)
+
1
decanedioyl-CoA
peroxisome
<=>
1
CoA
+
1
O-sebacoylcarnitine
peroxisome
MNXR96375
OCTC_HUMAN
-- Select --
OCTC_HUMAN
1
O-sebacoylcarnitine
extracellular region
<?>
1
O-sebacoylcarnitine
cytoplasm
MNXR96374
1
(R)-carnitine
+
1
H(+)
+
1
decanedioyl-CoA
cytoplasm
<=>
1
CoA
+
1
O-sebacoylcarnitine
cytoplasm
MNXR96375
CPT1A_HUMAN
CPT1B_HUMAN
CPT1C_HUMAN
-- Select --
CPT1A_HUMAN
CPT1B_HUMAN
CPT1C_HUMAN
1
CoA
+
1
O-sebacoylcarnitine
cytoplasm
<=>
1
decanedioyl-CoA
+
1
UNK:MAM02348
cytoplasm
NA
CPT1A_HUMAN
CPT1B_HUMAN
CPT1C_HUMAN
-- Select --
CPT1A_HUMAN
CPT1B_HUMAN
CPT1C_HUMAN
1
O-sebacoylcarnitine
extracellular region
<?>
1
O-sebacoylcarnitine
model boundary
MNXR96374
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