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MetaNetX
Automated Model Construction and Genome Annotation for Large-Scale Metabolic Networks
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SystemsX.ch
The Swiss Initiative in Systems Biology
My Selection
Summary
Pick from repository
Import model
Upload reactions
Delete models
Upload genome
Revived!
Analyze
Flux balance (FBA)
Groups of coupled reactions (GCR)
Blocked reactions (BLO)
Reaction knockout (RKO)
Gene/peptide knockout (PKO)
Create / Modify
Combine logically
Split and merge
Growth recovery (GRE)
Build from a genome (BUILD)
Revived!
Utilities
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MNXref ID mapper
new
SPARQL query
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Documents
Getting started
A short tutorial
Model internals
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Reactions with MNXM1104274
Add selected reac/enzy to a model in my sandbow, or create a new one
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Enzy
1
queuine
+
1
tRNA guanine
cytoplasm
<=>
1
guanine
+
1
tRNA queuine
cytoplasm
MNXR148354
QTRT2_HUMAN
TGT_HUMAN
-- Select --
QTRT2_HUMAN
TGT_HUMAN
1
guanosine(34) in tRNA
+
1
queuine
generic compartment 1
<=>
1
guanine
+
1
queuosine(34) in tRNA
generic compartment 1
MNXR165817
TGT_CAEEL
TGT_DANRE
TGT_DROME
TGT_HUMAN
TGT_MOUSE
TGT_RAT
TGT_SCHPO
TGT_XENTR
-- Select --
TGT_CAEEL
TGT_DANRE
TGT_DROME
TGT_HUMAN
TGT_MOUSE
TGT_RAT
TGT_SCHPO
TGT_XENTR
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